DataElement
publicId 6352164
version 2
longName Equipment Sequencing Model Name
shortName SEQ_LIB_INSTR_MOD_NM
definition The name that describes the specific model of equipment used to perform a sequencing experiment.
context MCL
origin MCL:Molecular and Cellular Characterization of Screened Lesions
workflowStatus RELEASED
registrationStatus Qualified
latestVersionIndicator Yes
beginDate 2018-07-12
endDate
changeDescription 3/1/22 jk Designated, added CDS alt name and CSI. 6/3/20 jk upd def; removed Library CSI, added MCL Genomics Core CSI. 11/19/18 jk Released per PI/Maureen at Oct 2018 Steering Comm meeting. 7/12/18 jk created for MCL Genomics based on Sequence Read Archive (SRA) data element.
administrativeNotes 2/24/26 Added CIDC alts, CSI. mr; 6/23/25 Upd WFS/RS to Released/Qualified post June CRDC/DSS SC mtg. 5/21/25 Classified in GDC Candidate CSI, added alt name, alt def, per June 2025 GDC DD. sl; 5/19/25 Upd CRDC Alt Name to Sequencing Equipment Model per feedback from weekly leadership mtg. mr; 5/12/25 Tweaked definition before RFC released. RS upd to Application from Incomplete. mr; 5/7/25 Removed 'Platform' from LN, PQT, CRDC alt name to reduce confusion with old platform CDE 6347771. No concept change needed. mr; 4/29/25 Added CRDC std alt def. mr; 4/16/25 Changed RS to Incomplete as PVs are evaluated. Updated CRDC CSI. mr; 4/15/25 Versioned to 2.0 to update semantics for Code Map and to make changes to PVs for CRDC RFC 110-111 equipment mfr/model. mr; 10/29/24 per Henry/CodeMap task, add alt table LS; 1/19/23 Added CDS alt def, ref docs; removed general CDS CSI, added CDS|Sequencing CSI; per metadata template. mr
unresolvedIssues
deletedIndicator No
createdBy COLBERTM
dateCreated 2025-04-15
modifiedBy COLBERTM
dateModified 2026-02-27
DataElementConcept
publicId 6273338
version 2
longName Equipment Sequencing Model
shortName 2236764v1.00:16081753v1.00
definition A manufactured object that is used to perform diagnostic, therapeutic or research activities.:The name and/or number associated with a specific sequencing platform.
context MCL
origin MCL:Molecular and Cellular Characterization of Screened Lesions
workflowStatus RELEASED
registrationStatus Qualified
latestVersionIndicator Yes
beginDate 2018-05-11
endDate
changeDescription 10/21/20 jk per SME, moved DEC from Library CSI to MCL Genomics Core CSI. 11/19/18 jk Released per PI/Maureen at Oct 2018 Steering Comm meeting. 5/11/18 jk created for MCL Genomics per list provided by WG.
administrativeNotes 6/23/25 Upd WFS/RS to Released/Qualified post June CRDC/DSS SC mtg. jk 5/7/25 Removed 'Platform' from LN to reduce confusion with old sequencing platform CDE. No concept change needed. mr; 4/23/25 Upd property to new concept C216080. mr; 4/15/25 Versioned to 2.0 to update semantics for Code Map and CRDC RFC 110-111 equipment mfr/model. mr;
unresolvedIssues
deletedIndicator No
createdBy COLBERTM
dateCreated 2025-04-15
modifiedBy JKNABLE
dateModified 2025-06-23
ObjectClass
publicId 2236764
version 1
longName Diagnostic, Therapeutic, and Research Equipment
shortName C19238
definition An object needed to perform a diagnostic, therapeutic or research activity.
context NCIP
origin NCI Thesaurus
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2005-06-20
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy UMLLOADER_MAGE
dateCreated 2005-06-20
modifiedBy SBREXT
dateModified 2007-11-07
Concepts
longName Diagnostic, Therapeutic, or Research Equipment
conceptCode C19238
definition A manufactured object that is used to perform diagnostic, therapeutic or research activities.
evsSource NCI_CONCEPT_CODE
primaryIndicator Yes
displayOrder 0
Property
publicId 16081753
version 1
longName Sequencing Platform Model
shortName C216080
definition The name and/or number associated with a specific sequencing platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2025-04-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy COLBERTM
dateCreated 2025-04-23
modifiedBy COLBERTM
dateModified 2025-04-23
Concepts
longName Sequencing Platform Model
conceptCode C216080
definition The name and/or number associated with a specific sequencing platform model.
evsSource NCI_CONCEPT_CODE
primaryIndicator Yes
displayOrder 0
ConceptualDomain
publicId 2435020
version 1
longName Diagnostic, Therapeutic, and Research Equipment
shortName C19238
definition An object needed to perform a diagnostic, therapeutic or research activity.
context NCIP
origin NCI Thesaurus
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2005-12-06
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy CURTIST
dateCreated 2005-12-06
modifiedBy SBR
dateModified 2006-12-20
ValueDomain
publicId 6298112
version 2
longName Sequencing Model Name
shortName 6298112v2.00
definition The name and/or number associated with a specific sequencing platform._The words or language units by which a thing is known.
context MCL
type Enumerated
dataType CHARACTER
minLength
maxLength 50
minValue
maxValue
decimalPlace
origin MCL:Molecular and Cellular Characterization of Screened Lesions
workflowStatus RELEASED
registrationStatus Qualified
latestVersionIndicator Yes
beginDate 2018-05-21
endDate
changeDescription 3/31/21 jk added 4 "Illumina" PVs in same format as existing, "r" chg to "R" per 2021 template review. 12/22/20 jk Added PVs per Dec 2020 Data Dictionary review. 10/21/20 jk per SME, moved DEC from Library CSI to MCL Genomics Core CSI. 11/19/18 jk Released per PI/Maureen at Oct 2018 Steering Comm meeting. 5/21/18 jk created for MCL Genomics based on Sequence Read Archive (SRA) data element.
administrativeNotes 2/27/26 Added Illumina MiSeq PV for CIDC. mr; 6/23/25 Upd WFS/RS to Released/Qualified post June CRDC/DSS SC mtg. jk 5/12/25 Upd RS to Application from Incomplete in preparation for RFC release. mr; 5/9/25 Deleted PV 'Complete Genomics' as it is a mfr, not a model. mr; 5/7/25 Removed 'Platform' from LN to reduce confusion with old platform CDE. No concept change needed. mr; 4/23/25 Upd qualifier to new C216080 concept. mr; 4/16/25 Changed RS to Incomplete as PVs are evaluated. mr; 4/15/25 Versioned to 2.0 to update semantics for Code Map and to make changes to PVs for CRDC RFC 110-111 equipment mfr/model. mr; 8/12/24 Added new PV for CDS on 8/12/24. mr; 1/25/24 Added new PV for CDS on 1/23/24. mr; 12/5/23 Upd NextSeq 550 to include "Illumina" per SME rquest. Added original PV name as alt name(s) where Illumina was added. mr; 12/4/23 updated NextSeq 500 VM LN to include "Illumina" per SME request; VM only using in a single CDE 6352164. jk
unresolvedIssues
deletedIndicator No
createdBy COLBERTM
dateCreated 2025-04-15
modifiedBy COLBERTM
dateModified 2026-02-17
PermissibleValues
publicId 9193585
value Ion Torrent Proton
valueDescription Ion Torrent Proton
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301200
version 1
longName Ion Torrent Proton
shortName 6301200
definition The Ion Torrent Proton is a model type of the Ion Torrent sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193586
value Ion Torrent PGM
valueDescription Ion Torrent PGM
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301201
version 1
longName Ion Torrent PGM
shortName 6301201
definition The Ion Torrent PGM is a model type of the Ion Torrent sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193587
value PacBio RS II
valueDescription PacBio RS II
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301202
version 1
longName PacBio RS II
shortName 6301202
definition The PacBio RS II is a model type of the PacBio SMRT sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193588
value PacBio RS
valueDescription PacBio RS
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301203
version 1
longName PacBio RS
shortName 6301203
definition The PacBio RS is a model type of the PacBio SMRT sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193590
value 454 GS 20
valueDescription 454 GS 20
origin
beginDate 2018-05-21
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6298113
version 1
longName 454 GS 20
shortName 6298113
definition The 454 GS 20 is a model type of the LS454 sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-21
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-21
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193591
value 454 GS
valueDescription 454 GS
origin
beginDate 2018-05-21
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6298114
version 1
longName 454 GS
shortName 6298114
definition The 454 GS is a model type of the LS454 sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-21
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-21
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193592
value Illumina NextSeq 550
valueDescription NextSeq 550
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy COLBERTM
dateModified 2025-04-15
ValueMeaning
publicId 6300040
version 1
longName Illumina NextSeq 550
shortName 6300040
definition The NextSeq 550 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2026-02-27
Designations
languageName ENGLISH
name NextSeq 550
type MCL Alt Name
context MCL
id 0BC7A73F-F159-2935-E063-731AD00AD396
createdBy Maureen Ryan
dateCreated 2023-12-05
modifiedBy COLBERTM
dateModified 2023-12-05
languageName ENGLISH
name Illumina - NextSeq 550
type CIDC Alt Name
context CRDC
id 4BD39F4B-0434-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
publicId 9193593
value Illumina NextSeq 500
valueDescription NextSeq 500
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy JKNABLE
dateModified 2025-04-15
ValueMeaning
publicId 6300041
version 1
longName Illumina NextSeq 500
shortName 6300041v1.00
definition The NextSeq 500 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2023-12-05
Designations
languageName ENGLISH
name NextSeq 500
type MCL Alt Name
context MCL
id 0BC7AAB0-3406-2A17-E063-731AD00A10B4
createdBy Maureen Ryan
dateCreated 2023-12-05
modifiedBy COLBERTM
dateModified 2023-12-05
publicId 9193594
value Illumina MiSeq
valueDescription Illumina MiSeq
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300042
version 1
longName Illumina MiSeq
shortName 6300042
definition The Illumina MiSeq is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2026-02-27
Designations
languageName ENGLISH
name Illumina - MiSeq
type CIDC Alt Name
context CRDC
id 4BD39F4B-0435-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
languageName ENGLISH
name MiSeq
type CIDC Alt Name
context CRDC
id 4BD39F4B-0436-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
publicId 9193595
value Illumina MiniSeq
valueDescription Illumina MiniSeq
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300043
version 1
longName Illumina MiniSeq
shortName 6300043
definition The Illumina MiniSeq is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193596
value Illumina HiSeq 4000
valueDescription Illumina HiSeq 4000
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300044
version 1
longName Illumina HiSeq 4000
shortName 6300044
definition The Illumina HiSeq 4000 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2026-02-27
Designations
languageName ENGLISH
name Illumina - HiSeq 4000
type CIDC Alt Name
context CRDC
id 4BD39F4A-FE2C-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
publicId 9193597
value Illumina HiSeq 3000
valueDescription Illumina HiSeq 3000
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300045
version 1
longName Illumina HiSeq 3000
shortName 6300045
definition The Illumina HiSeq 3000 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2026-02-27
Designations
languageName ENGLISH
name Illumina - HiSeq 3000
type CIDC Alt Name
context CRDC
id 4BD39F4A-FE44-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
publicId 9193598
value Illumina HiSeq 2500
valueDescription Illumina HiSeq 2500
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300046
version 1
longName Illumina HiSeq 2500
shortName 6300046
definition The Illumina HiSeq 2500 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy COLBERTM
dateModified 2026-02-27
Designations
languageName ENGLISH
name Illumina - HiSeq 2500
type CIDC Alt Name
context CRDC
id 4BD39F4A-FE2B-09D1-E063-731AD00AFCD0
createdBy Maureen Ryan
dateCreated 2026-02-17
modifiedBy COLBERTM
dateModified 2026-02-27
publicId 9193599
value Illumina HiSeq 2000
valueDescription Illumina HiSeq 2000
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300047
version 1
longName Illumina HiSeq 2000
shortName 6300047
definition the Illumina HiSeq 2000 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193600
value Illumina HiSeq 1500
valueDescription Illumina HiSeq 1500
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300048
version 1
longName Illumina HiSeq 1500
shortName 6300048
definition The Illumina HiSeq 1500 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193601
value Illumina HiSeq 1000
valueDescription Illumina HiSeq 1000
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300049
version 1
longName Illumina HiSeq 1000
shortName 6300049
definition The Illumina HiSeq 1000 is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193602
value Illumina HiScanSQ
valueDescription Illumina HiScanSQ
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6300050
version 1
longName Illumina HiScanSQ
shortName 6300050
definition The Illumina HiScanSQ is a model type of the Illumina sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy KNABLEJ
dateModified 2018-05-23
publicId 9193603
value BGISEQ-500
valueDescription BGISEQ-500
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301204
version 1
longName BGISEQ-500
shortName 6301204
definition The BGISEQ-500 is a model type of the BGISEQ sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
publicId 9193604
value PromethION
valueDescription PromethION
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301205
version 1
longName PromethION
shortName 6301205
definition The PromethION is a model type of the Oxford Nanopore sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
publicId 9193605
value MinION
valueDescription MinION
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301206
version 1
longName MinION
shortName 6301206
definition The MinION is a model type of the Oxford Nanopore sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
publicId 9193606
value GridION
valueDescription GridION
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301207
version 1
longName GridION
shortName 6301207
definition The GridION is a model type of the Oxford Nanopore sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
publicId 9193607
value AB 3730xL Genetic Analyzer
valueDescription AB 3730xL Genetic Analyzer
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301208
version 1
longName AB 3730xL Genetic Analyzer
shortName 6301208
definition The AB 3730xL Genetic Analyzer is a model type of the AB Capillary sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
publicId 9193608
value AB 3730 Genetic Analyzer
valueDescription AB 3730 Genetic Analyzer
origin
beginDate 2018-05-23
endDate
deletedIndicator No
createdBy KNABLEJ
dateCreated 2025-04-15
modifiedBy ONEDATA
dateModified 2025-04-15
ValueMeaning
publicId 6301209
version 1
longName AB 3730 Genetic Analyzer
shortName 6301209
definition The AB 3730 Genetic Analyzer is a model type of the AB Capillary sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
latestVersionIndicator Yes
beginDate 2018-05-23
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KNABLEJ
dateCreated 2018-05-23
modifiedBy ONEDATA
dateModified 2018-05-23
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beginDate 2018-05-23
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beginDate 2018-05-23
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definition The PacBio Sequel is a model type of the PacBio SMRT sequencing library platform.
context NCIP
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workflowStatus RELEASED
registrationStatus Application
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endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KUMMEROA
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publicId 9193640
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origin
beginDate 2023-05-08
endDate
deletedIndicator No
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dateCreated 2025-04-15
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dateModified 2025-04-15
ValueMeaning
publicId 13526883
version 1
longName PacBio Sequel II
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definition The PacBio Sequel II is a model type of the PacBio SMRT sequencing library platform.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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beginDate 2023-05-08
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changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KUMMEROA
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publicId 9193641
value DNBSEQ-G50
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beginDate 2023-05-08
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deletedIndicator No
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ValueMeaning
publicId 13526880
version 1
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context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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beginDate 2023-05-08
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
createdBy KUMMEROA
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publicId 9193642
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beginDate 2023-05-08
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deletedIndicator No
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ValueMeaning
publicId 13526871
version 1
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
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workflowStatus RELEASED
registrationStatus Application
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endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-05-08
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deletedIndicator No
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ValueMeaning
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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beginDate 2023-05-08
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-05-08
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deletedIndicator No
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
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workflowStatus RELEASED
registrationStatus Application
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endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-05-08
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deletedIndicator No
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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beginDate 2023-05-08
endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-05-08
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deletedIndicator No
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ValueMeaning
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-05-08
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deletedIndicator No
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ValueMeaning
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definition A proprietary next-generation DNA sequencing system from Applied Biosystems that utilizes DNA ligase. DNA fragments attached to beads are clonally amplified and ligated to fluorescently labeled "interrogation probes". Ligation frees the fluor, which is detected and identifies the specific probe. The marker of the attached probe is then removed and a 5'-phosphate group is regenerated. Multiple cycles of ligation, detection, and cleavage are performed.
context NCIP
origin
workflowStatus RELEASED
registrationStatus Application
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endDate
changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2023-12-05
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deletedIndicator No
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ValueMeaning
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context NCIP
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workflowStatus RELEASED
registrationStatus Application
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changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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Designations
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name Illumina - NovaSeq 6000
type CIDC Alt Name
context CRDC
id 4BD39F4A-FE2D-09D1-E063-731AD00AFCD0
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beginDate 2024-01-23
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deletedIndicator No
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ValueMeaning
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context NCIP
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workflowStatus RELEASED
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changeDescription
administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2024-04-22
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deletedIndicator No
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ValueMeaning
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administrativeNotes
unresolvedIssues
deletedIndicator No
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beginDate 2024-08-12
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ValueMeaning
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context NCIP
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administrativeNotes
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deletedIndicator No
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beginDate 2025-05-09
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deletedIndicator No
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context NCIP
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workflowStatus RELEASED
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changeDescription
administrativeNotes
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deletedIndicator No
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deletedIndicator No
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ValueMeaning
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workflowStatus RELEASED
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changeDescription
administrativeNotes
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deletedIndicator No
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ValueMeaning
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deletedIndicator No
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deletedIndicator No
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deletedIndicator No
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beginDate 2025-05-09
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deletedIndicator No
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deletedIndicator No
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beginDate 2025-05-09
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deletedIndicator No
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workflowStatus RELEASED
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deletedIndicator No
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deletedIndicator No
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changeDescription
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deletedIndicator No
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deletedIndicator No
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context MCL
documentName MCL-Template Name
documentText mcl_genomics_v0-1_20210126
documentType Data Collection Template
url https://mcl.nci.nih.gov/resources/standards/mcl-cdes
context MCL
documentName CDS
documentText Please provide the term from the value set (based on platform value)
documentType Coding Instructions
url
context CRDC
documentName CDS
documentText 454 GS FLX Titanium; Illumina HiSeq 2000
documentType EXAMPLE
url
context CRDC
apiResponse
type S