| DataElement |
| publicId |
14461856 |
| version |
1 |
| longName |
Therapeutic Procedure Anatomic Site Uberon Identifier |
| shortName |
13336634v1.00:11365369v1.00 |
| definition |
The Uberon identifier for the location within the body targeted by a therapeutic procedure that is intended to alter or stop a pathologic process. |
| context |
CRDC |
| origin |
CRDC:Cancer Research Data Commons |
| workflowStatus |
RELEASED |
| registrationStatus |
Standard |
| latestVersionIndicator |
Yes |
| beginDate |
2023-09-05 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
7/21/26 added CIDC Appendix A Alts, definition, and CSI. jk
10/23/25 Added CTDC Radiotherapy Alt name/table/CSI. jk;
5/22/25 Classified in GDC Candidate CSI, added alt name, alt def, per June 2025 GDC DD. sl;
9/20/24 Upd PQT for harmonization w other Uberon CDEs. mr;
6/18/24 Corrected typo in CDE definition. mr;
4/26/24 Upd Example to use colon instead of underscore, per email from Sherita Alai. mr;
4/23/24 Released per CRDC DSS SN CADSR0003666. mr;
4/22/24 Added CRDC CSI. Deleted CRDC alt name/def from 9/23 as new ones have been curated. mr;
1/17/24 per DSS call today updated DN CDE to use Uberon VD, DEC to include anatomic site and revised definition to reflect use of Uberon id as representation. jk; 9/5/23 Created per CRDC DSS. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2023-09-05 |
| modifiedBy |
JKNABLE |
| dateModified |
2026-07-21 |
| DataElementConcept |
| publicId |
13336634 |
| version |
1 |
| longName |
Therapeutic Procedure Anatomic Site |
| shortName |
2512834v1.00:2186622v1.00 |
| definition |
An action or administration of therapeutic agents to produce an effect that is intended to alter or stop a pathologic process.:Named locations of or within the body. |
| context |
Pediatric Cancer |
| origin |
CRDC:Cancer Research Data Commons |
| workflowStatus |
RELEASED |
| registrationStatus |
Qualified |
| latestVersionIndicator |
Yes |
| beginDate |
2023-04-10 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
4/26/24 Released per CRDC DSS SN CADSR0003666. mr;
1/17/24 txfr ownership to CRDC for Uberon updates in associated CDE; existing PCDC CDE 13361747 associated with new DEC to better align with latest PCDC DD. jk; 4/24/2023: update the short name to match OC public ID and added Origin to DEC.wz |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
JKNABLE |
| dateCreated |
2023-04-10 |
| modifiedBy |
COLBERTM |
| dateModified |
2024-04-26 |
| ObjectClass |
| publicId |
2512834 |
| version |
1 |
| longName |
Therapeutic Procedure |
| shortName |
C49236 |
| definition |
An action or administration of therapeutic agents to produce an effect that is intended to alter the course of a pathologic process. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2006-08-21 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
UMLLOADER_AGNIS |
| dateCreated |
2006-08-21 |
| modifiedBy |
SBREXT |
| dateModified |
2007-11-07 |
| Concepts |
| longName |
Therapeutic Procedure |
| conceptCode |
C49236 |
| definition |
Medical care intended to treat or cure a condition or lessen its symptoms. This includes the administration of drugs, surgical procedures, physical or psychotherapy, or the use of therapeutic devices. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| Property |
| publicId |
2186622 |
| version |
1 |
| longName |
Anatomic Site |
| shortName |
C13717 |
| definition |
Named locations of, or within, the body. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2004-08-05 |
| endDate |
|
| changeDescription |
Updated to point to NCI Thesaurus concept code. |
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
REEVESD |
| dateCreated |
2004-08-05 |
| modifiedBy |
DATA_LOADER |
| dateModified |
2005-10-19 |
| Concepts |
| longName |
Anatomic Site |
| conceptCode |
C13717 |
| definition |
Named locations of or within the body. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| ConceptualDomain |
| publicId |
2435018 |
| version |
1 |
| longName |
Clinical or Research Activity |
| shortName |
C16203 |
| definition |
Any specific activity undertaken during the course of a clinical study or research protocol. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2005-12-06 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
CURTIST |
| dateCreated |
2005-12-06 |
| modifiedBy |
SBR |
| dateModified |
2006-12-20 |
|
|
| ValueDomain |
| publicId |
11365369 |
| version |
1 |
| longName |
Uberon Identifier |
| shortName |
11365369v1.00 |
| definition |
A symbol or combination of symbols and characters to capture the UBERON anatomic site code (ex: UBERON:0006209 or UBERON_0006209)._One or more characters used to identify, name, or characterize the nature, properties, or contents of a thing. |
| context |
CRDC |
| type |
Enumerated by Reference |
| referenceTerminology |
Uberon|C190111 |
| referenceTerminologyDataValueSource |
Code |
| dataType |
CHARACTER |
| minLength |
|
| maxLength |
30 |
| minValue |
|
| maxValue |
|
| decimalPlace |
|
| origin |
CRDC:Cancer Research Data Commons |
| workflowStatus |
RELEASED |
| registrationStatus |
Qualified |
| latestVersionIndicator |
Yes |
| beginDate |
2022-10-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
5/15/24 Modified PV to be the URL to Uberon. Per mtg w DW on 5/2/24.
4/23/24 Released per DSS for use in the Anatomic Site CDEs. mr;
3/28/23 Upd VD type from Enumerated to Enumerated by-reference for this existing by-ref VD. We retained the existing ref docs pointing to the external source. mr;
2/1/23 Released per CRDC DSS mtg 2/1. Possible versioning/revisions in future if by-reference/external std policies change. mr;
1/5/23 Updated CD to be consistent w other CRDC AIs. mr;
12/28/22 Updated Coding Instruction to be consistent w other by-reference CDEs. mr;
12/7/22 Changed rep term from Code to ID since Uberon calls it an ID. mr;
12/6/22 Changed to enumerated and added single PV pointing to Uberon. mr;
11/21/22 Released per CRDC DSS. mr;
11/17/22 Changed rep term from Anat Site to Code. mr;
10/5/22 Per Smita and Wendy, this DE/DEC/VD is on hold until external reference is determined and mapped. mr;
10/3/22 Created per CRDC DSS. mr; |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-10-03 |
| modifiedBy |
SLAUER |
| dateModified |
2025-07-08 |
| PermissibleValues |
| publicId |
9109702 |
| value |
https://www.ebi.ac.uk/ols4/ontologies/uberon |
| valueDescription |
|
| origin |
|
| beginDate |
2022-12-06 |
| endDate |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-12-06 |
| modifiedBy |
COLBERTM |
| dateModified |
2024-05-15 |
| ValueMeaning |
| publicId |
12126011 |
| version |
1 |
| longName |
Uberon |
| shortName |
12126011v1.00 |
| definition |
An integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function, and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data. |
| context |
NCIP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-12-06 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-12-06 |
| modifiedBy |
JKNABLE |
| dateModified |
2024-04-29 |
| Concepts |
| longName |
Uberon |
| conceptCode |
C190111 |
| definition |
An integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function, and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
|
|
| ConceptualDomain |
| publicId |
2435018 |
| version |
1 |
| longName |
Clinical or Research Activity |
| shortName |
C16203 |
| definition |
Any specific activity undertaken during the course of a clinical study or research protocol. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2005-12-06 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
CURTIST |
| dateCreated |
2005-12-06 |
| modifiedBy |
SBR |
| dateModified |
2006-12-20 |
|
| RepresentationTerm |
| publicId |
12129175 |
| version |
1 |
| longName |
Uberon Identifier |
| shortName |
12129175v1.00 |
| definition |
An integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function, and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data._One or more characters used to identify, name, or characterize the nature, properties, or contents of a thing. |
| context |
NCIP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-12-07 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-12-07 |
| modifiedBy |
COLBERTM |
| dateModified |
2022-12-07 |
| Concepts |
| longName |
Uberon |
| conceptCode |
C190111 |
| definition |
An integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function, and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
No |
| displayOrder |
1 |
|
| longName |
Identifier |
| conceptCode |
C25364 |
| definition |
One or more characters used to identify, name, or characterize the nature, properties, or contents of a thing. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
|
| ClassificationSchemes |
| publicId |
10429357 |
| version |
1 |
| longName |
GDC (Genomic Data Commons) |
| context |
CRDC |
| workflowStatus |
DRAFT NEW |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
14506028 |
| version |
1 |
| longName |
Candidate New GDC CDEs |
| context |
CRDC |
| workflowStatus |
DRAFT NEW |
| registrationStatus |
Application |
|
|
|
| publicId |
10466051 |
| version |
1 |
| longName |
All CRDC Standard CDEs |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
10466198 |
| version |
1 |
| longName |
Treatment |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
| publicId |
11518160 |
| version |
1 |
| longName |
CTDC (Clinical and Translational Data Commons) |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
14413707 |
| version |
1 |
| longName |
CTDC Model |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
14931970 |
| version |
1 |
| longName |
Clinical Trial |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
16075375 |
| version |
1 |
| longName |
CIDC Model |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
16075989 |
| version |
1 |
| longName |
Treatment |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
16075991 |
| version |
1 |
| longName |
Treatment Dose |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
|
| AlternateNames |
| name |
Treatment Anatomic Site UBERON Identifier |
| type |
CRDC Alt Name |
| context |
CRDC |
|
| name |
treatment_anatomic_site |
| type |
GDC Alt Name |
| context |
GDC |
|
| name |
radiological_procedure_anatomical_location |
| type |
CTDC Alt Name |
| context |
CRDC |
|
| name |
anatomical_location |
| type |
CIDC Alt Name |
| context |
CRDC |
|
| name |
radiotherapy_dose |
| type |
CIDC Table |
| context |
CRDC |
|
| name |
surgery |
| type |
CIDC Table |
| context |
CRDC |
|
|
| ReferenceDocuments |
| documentName |
PQT |
| documentText |
Treatment Anatomic Site Uberon ID |
| documentType |
Preferred Question Text |
| url |
|
| context |
CRDC |
|
| documentName |
CRDC Instruction |
| documentText |
1. Go to https://www.ebi.ac.uk/ols4/ontologies/uberon
2. Use the search field to search for your term.
3. Use the Copy button at the top of the search results to copy the Uberon ID. |
| documentType |
Instructions |
| url |
https://www.ebi.ac.uk/ols4/ontologies/uberon |
| context |
CRDC |
|
| documentName |
CRDC Example |
| documentText |
UBERON:0002048 |
| documentType |
EXAMPLE |
| url |
|
| context |
CRDC |
|
| documentName |
CRDC SDO Reference |
| documentText |
UBERON |
| documentType |
REFERENCE |
| url |
https://www.ebi.ac.uk/ols4/ontologies/uberon |
| context |
CRDC |
|
|
|