| publicId |
11529035 |
| version |
1 |
| longName |
Sequencing Library Sequence Read Count |
| shortName |
11529034v1.00:7801056v1.00 |
| definition |
The number of sequencing reaction results that were pooled to assemble a sequence for a genomic region of interest. |
| context |
CRDC |
| origin |
CDS:Cancer Data Service |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
2/20/24 AI released per SME/Amanda Bell approval. ls5/16/23 changed origin to CDS. BF; 1/19/23 Added CDS alt name, alt def; removed general CDS CSI, added CDS|Sequencing CSI; per metadata template. mr
1/16/23 upd to use CRDC Count VD 7801056, jk 11/3/22 Created per CRDC CDS submission metatdata template. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-11-03 |
| modifiedBy |
SOKKERL |
| dateModified |
2024-10-23 |
| DataElementConcept |
| publicId |
11529034 |
| version |
1 |
| longName |
Sequencing Library Sequence Read Count |
| shortName |
6273321v1.00:11529033v1.00 |
| definition |
A collection of double stranded DNA fragments flanked by oligonucleotide sequence adapters to enable their analysis by high-throughput sequencing.:The number of sequencing reaction results that were pooled to assemble a sequence for a genomic region of interest. |
| context |
CRDC |
| origin |
CDS:Cancer Data Service |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
2/20/24 AI released per SME/Amanda Bell approval.ls5/17/23 changed origin to CDS. BF; 11/3/22 Created per CRDC CDS submission metatdata template. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-11-03 |
| modifiedBy |
SOKKERL |
| dateModified |
2024-02-20 |
| ObjectClass |
| publicId |
6273321 |
| version |
1 |
| longName |
Sequencing Library |
| shortName |
C148073 |
| definition |
A collection of double stranded DNA fragments flanked by oligonucleotide sequence adapters to enable their analysis by high-throughput sequencing. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2018-05-11 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
KNABLEJ |
| dateCreated |
2018-05-11 |
| modifiedBy |
ONEDATA |
| dateModified |
2018-05-11 |
| Concepts |
| longName |
Sequencing Library |
| conceptCode |
C148073 |
| definition |
A collection of double stranded DNA fragments flanked by oligonucleotide sequence adapters to enable their analysis by high-throughput sequencing. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| Property |
| publicId |
11529033 |
| version |
1 |
| longName |
Sequence Read Count |
| shortName |
C164667 |
| definition |
The number of sequencing reaction results that were pooled to assemble a sequence for a genomic region of interest. |
| context |
NCIP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-11-03 |
| modifiedBy |
COLBERTM |
| dateModified |
2022-11-03 |
| Concepts |
| longName |
Sequence Read Count |
| conceptCode |
C164667 |
| definition |
The number of sequencing reaction results that were pooled to assemble a sequence for a genomic region of interest. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| ConceptualDomain |
| publicId |
2435018 |
| version |
1 |
| longName |
Clinical or Research Activity |
| shortName |
C16203 |
| definition |
Any specific activity undertaken during the course of a clinical study or research protocol. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2005-12-06 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
CURTIST |
| dateCreated |
2005-12-06 |
| modifiedBy |
SBR |
| dateModified |
2006-12-20 |
|
|
| ValueDomain |
| publicId |
7801056 |
| version |
1 |
| longName |
Count |
| shortName |
7801056v1.0 |
| definition |
The quantity of the specified item. |
| context |
HTAN |
| type |
Non-enumerated |
| dataType |
Integer |
| minLength |
1 |
| maxLength |
10 |
| minValue |
|
| maxValue |
|
| decimalPlace |
0 |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2021-10-27 |
| endDate |
|
| changeDescription |
10/27/21jk created for HTAN CDEs. |
| administrativeNotes |
9/25/23: Released melanoma AI per 3Q23 metric report review. LS |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
KNABLEJ |
| dateCreated |
2021-10-27 |
| modifiedBy |
GDEEN |
| dateModified |
2026-08-10 |
| ConceptualDomain |
| publicId |
2008541 |
| version |
1 |
| longName |
Numbers |
| shortName |
NUMS |
| definition |
the set of non-negative integers. |
| context |
CTEP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2002-12-19 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
MSUPLEY |
| dateCreated |
2002-12-19 |
| modifiedBy |
SBR |
| dateModified |
2003-10-29 |
|
| RepresentationTerm |
| publicId |
2261845 |
| version |
1 |
| longName |
Count |
| shortName |
C25463 |
| definition |
To determine the number or amount of something; the result of this activity. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Standard |
| latestVersionIndicator |
Yes |
| beginDate |
2005-07-13 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
REEVESD |
| dateCreated |
2005-07-13 |
| modifiedBy |
ONEDATA |
| dateModified |
2005-07-13 |
| Concepts |
| longName |
Count |
| conceptCode |
C25463 |
| definition |
Determining the number or amount of something. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
|
| ClassificationSchemes |
| publicId |
8064110 |
| version |
1 |
| longName |
GC (General Commons) |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
12177495 |
| version |
1 |
| longName |
Sequencing |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
| publicId |
13574489 |
| version |
1 |
| longName |
CCDI (Childhood Cancer Data Initiative) |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
13594094 |
| version |
1 |
| longName |
Sequencing |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
13594223 |
| version |
1 |
| longName |
Sequencing File |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
| publicId |
13594225 |
| version |
1 |
| longName |
Single Cell Sequencing File |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
|
| AlternateNames |
| name |
number_of_reads |
| type |
GC Alt Name |
| context |
CRDC |
|
| name |
number_of_reads |
| type |
CCDI Alt Name |
| context |
Pediatric Cancer |
|
| name |
sequencing_file |
| type |
CCDI Table |
| context |
Pediatric Cancer |
|
|
| ReferenceDocuments |
| documentName |
PQT |
| documentText |
Number of Sequencing Reads |
| documentType |
Preferred Question Text |
| url |
|
| context |
CRDC |
|
|