| publicId |
11529031 |
| version |
2 |
| longName |
Genome Assembly NCBI Genetic Reference Sequence Text |
| shortName |
11529030v1.00:6784451v2.00 |
| definition |
One or more characters used to identify the published NCBI genetic sequence that is used as a reference against which other sequences are compared. |
| context |
CRDC |
| origin |
CDS:Cancer Data Service |
| workflowStatus |
DRAFT MOD |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
10/23/24 Versioned CDE to use generic v2.0 of VD that removed 255 Char from LN. ls; 2/20/24 AI released per SME/Amanda Bell approval. ls12/13/23 Updated VD from Identifier to 255 Text based reuse request. mr;
5/16/23 changed origin to CDS. BF; 11/3/22 Created per CRDC CDS submission template. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
SOKKERL |
| dateCreated |
2024-10-23 |
| modifiedBy |
SOKKERL |
| dateModified |
2024-10-23 |
| DataElementConcept |
| publicId |
11529030 |
| version |
1 |
| longName |
Genome Assembly NCBI Genetic Reference Sequence |
| shortName |
6273321v1.00:11529029v1.00 |
| definition |
An annotated assembly of genome sequences created by the assimilation of data pieces from numerous sources.:Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information - all for the better understanding of molecular processes affecting human health and disease._A published genetic sequence that is used as a reference sequence against which other sequences are compared. |
| context |
CRDC |
| origin |
CDS:Cancer Data Service |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
2/20/24 AI released per SME/Amanda Bell approval.ls5/17/23 changed origin to CDS. BF; 1/22/23 updated concepts to reflect CDS def. jk 11/3/22 Created per CRDC CDS submission metatdata template. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-11-03 |
| modifiedBy |
SOKKERL |
| dateModified |
2024-02-20 |
| ObjectClass |
| publicId |
11529068 |
| version |
1 |
| longName |
Genome Assembly Sequence |
| shortName |
C73517 |
| definition |
An annotated assembly of genome sequences created by the assimilation of data pieces from numerous sources. |
| context |
NCIP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2022-11-03 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2022-11-03 |
| modifiedBy |
COLBERTM |
| dateModified |
2022-11-03 |
| Concepts |
| longName |
Genome Assembly Sequence |
| conceptCode |
C73517 |
| definition |
An annotated assembly of genome sequences created by the assimilation of data pieces from numerous sources. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| Property |
| publicId |
12426614 |
| version |
1 |
| longName |
National Center for Biotechnology Information Genetic Reference Sequence |
| shortName |
C45799:C164388 |
| definition |
Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information - all for the better understanding of molecular processes affecting human health and disease._A published genetic sequence that is used as a reference sequence against which other sequences are compared. |
| context |
NCIP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2023-01-22 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
JKNABLE |
| dateCreated |
2023-01-22 |
| modifiedBy |
JKNABLE |
| dateModified |
2023-01-22 |
| Concepts |
| longName |
National Center for Biotechnology Information |
| conceptCode |
C45799 |
| definition |
Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information - all for the better understanding of molecular processes affecting human health and disease. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
No |
| displayOrder |
1 |
|
| longName |
Genetic Reference Sequence |
| conceptCode |
C164388 |
| definition |
A published genetic sequence that is used as a reference sequence against which other sequences are compared. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
| ConceptualDomain |
| publicId |
2435018 |
| version |
1 |
| longName |
Clinical or Research Activity |
| shortName |
C16203 |
| definition |
Any specific activity undertaken during the course of a clinical study or research protocol. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2005-12-06 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
CURTIST |
| dateCreated |
2005-12-06 |
| modifiedBy |
SBR |
| dateModified |
2006-12-20 |
|
|
| ValueDomain |
| publicId |
6784451 |
| version |
2 |
| longName |
Text |
| shortName |
6784451v2.00 |
| definition |
The words of something written. |
| context |
OCCPR |
| type |
Non-enumerated |
| dataType |
CHARACTER |
| minLength |
|
| maxLength |
255 |
| minValue |
|
| maxValue |
|
| decimalPlace |
|
| origin |
CPTAC: Clinical Proteomic Tumor Analysis Consortium |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2019-06-18 |
| endDate |
|
| changeDescription |
11/10/19 jk Released per CPTAC SME (Linda) for Medical History CRF. 6-18-19 tt created for CPTAC Medical History CRF. |
| administrativeNotes |
6/11/24 Versioned to v2.0 to remove words from LN not present in semantics. mr |
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
COLBERTM |
| dateCreated |
2024-06-11 |
| modifiedBy |
GDEEN |
| dateModified |
2026-06-18 |
| ConceptualDomain |
| publicId |
2008551 |
| version |
1 |
| longName |
Assessments |
| shortName |
ASSESS |
| definition |
evaluations of the patient and the patient's disease. |
| context |
CTEP |
| origin |
|
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| latestVersionIndicator |
Yes |
| beginDate |
2002-12-19 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
MSUPLEY |
| dateCreated |
2002-12-19 |
| modifiedBy |
SBR |
| dateModified |
2003-10-29 |
|
| RepresentationTerm |
| publicId |
2234203 |
| version |
1 |
| longName |
Text |
| shortName |
C25704 |
| definition |
Text; the words of something written. |
| context |
NCIP |
| origin |
NCI Thesaurus |
| workflowStatus |
RELEASED |
| registrationStatus |
Standard |
| latestVersionIndicator |
Yes |
| beginDate |
2005-06-14 |
| endDate |
|
| changeDescription |
|
| administrativeNotes |
|
| unresolvedIssues |
|
| deletedIndicator |
No |
| createdBy |
CAMPBELB |
| dateCreated |
2005-06-14 |
| modifiedBy |
SBR |
| dateModified |
2005-09-08 |
| Concepts |
| longName |
Text |
| conceptCode |
C25704 |
| definition |
The words of something written. |
| evsSource |
NCI_CONCEPT_CODE |
| primaryIndicator |
Yes |
| displayOrder |
0 |
|
|
|
|
| ClassificationSchemes |
| publicId |
8064110 |
| version |
1 |
| longName |
GC (General Commons) |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
12177495 |
| version |
1 |
| longName |
Sequencing |
| context |
CRDC |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
| publicId |
13574489 |
| version |
1 |
| longName |
CCDI (Childhood Cancer Data Initiative) |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
| ClassificationSchemeItems |
| publicId |
13594223 |
| version |
1 |
| longName |
Sequencing File |
| context |
Pediatric Cancer |
| workflowStatus |
RELEASED |
| registrationStatus |
Application |
|
|
|
|
| AlternateNames |
| name |
reference_genome_assembly |
| type |
GC Alt Name |
| context |
CRDC |
|
| name |
sequencing_file |
| type |
CCDI Table |
| context |
Pediatric Cancer |
|
| name |
reference_genome_assembly |
| type |
CCDI Alt Name |
| context |
Pediatric Cancer |
|
|
| ReferenceDocuments |
| documentName |
PQT |
| documentText |
Sequencing Library Reference Genome Assembly |
| documentType |
Preferred Question Text |
| url |
|
| context |
CRDC |
|
| documentName |
CDS |
| documentText |
Please provide NCBI name or accession number |
| documentType |
Coding Instructions |
| url |
|
| context |
CRDC |
|
| documentName |
CDS |
| documentText |
GRCh37 |
| documentType |
EXAMPLE |
| url |
|
| context |
CRDC |
|
|